Compartments¶
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cromosim.comp.iteration(it, Nrooms, DoorRoomCapacity, NPir, NPrir, NPwir, Nior, List_iOr, T_iOr, Flux)[source]¶ To run one iteration (which corresponds to 1 second) of the compartment model. The compartments shall be identified to nodes of a network, those nodes are connected by edges, which correspond to paths between nodesself.
- Parameters
- it: integer
iteration number
- Nrooms: int
number of rooms
- DoorRoomCapacity: numpy array
capacities of each door (number of persons per second)
- NPir: numpy array
numbers of persons for each room
- NPrir: numpy array
inlets for each room
- NPwir: numpy array
numbers of persons who are waiting to leave each room
- Nior: numpy array
numbers of inlets for each room
- List_iOr: numpy array
room numbers associated to the inlets for each room
- T_iOr: numpy array
travel times to cross each room
- Flux: numpy array
numbers of persons upstream the exits
- Returns
- Flux: numpy array
new numbers of persons upstream the exits
- NPir: numpy array
new numbers of persons for each room
- NPwir: numpy array
new numbers of persons who are waiting to leave each room
- NPrir: numpy array
new inlets for each room
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cromosim.comp.plot_compt(ifig, RoomNames, RoomCenters, DoorCenters, CircAngles, NPir, NPrir, NPwir, Nior, List_iOr, dom, area, savefig=False, filename='fig.png', title='')[source]¶ To draw
- Parameters
- ifig: int
figure number
- RoomNames: list
number of rooms
- RoomCenters: numpy array
coordinates of the room centers
- DoorCenters: numpy array
coordinates of the door centers
- CircAngles: numpy array
rotational angles of the half-disks localized at each door
- NPir: numpy array
numbers of persons for each room
- NPrir: numpy array
inlets for each room
- NPwir: numpy array
numbers of persons who are waiting to leave each room
- Nior: numpy array
numbers of inlets for each room
- List_iOr: numpy array
room numbers associated to the inlets for each room
- dom: Domain
contains everything for managing the domain
- area: float
typical area size in m^2 of one individual
- savefig: boolean
writes the figure as a png file if true
- filename: string
png filename used to write the figure
- title: string
title of the figure